Data content

• NanoWiki doi:10.6084/m9.figshare.3380458.v1

• Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles doi:10.1021/nn406018q

• In Vitro data from FP7 MARINA project (KI) doi:10.1371/journal.pone.0127174

• Dataset for modelling compiled by FP7 MODENA COST Action http://www.modena-cost.eu/

• caNanoLab doi:10.1088/1749-4699/6/1/014010

Implementation

The eNanoMapper prototype database is part of the computational infrastructure for toxicological data management of engineered nanomaterials, developed within the EU FP7 eNanoMapper project.

• User friendly data entry templates

• Provides support for upload, search and retrieval of nanomaterials and experimental data through a REST web services API and a web browser interface.

• Implemented by a customized version of AMBIT web services.

Documentation

• User guide

• Search and download tutorial

• More tutorials

• Browse and try eNanoMapper database REST API

eNanoMapper deliverables

Philip Doganis, Bengt Fadeel, Roland Grafström, Janna Hastings, Markus Hegi, Nina Jeliazkova, Vedrin Jeliazkov, Cristian Munteanu, Haralambos Sarimveis, Bart Smeets, Georgia Tsiliki, David Vorgrimmler, Egon Willighagen, Barry Hardy. (2015). Deliverable Report D3.1 Technical Specification and initial implementation of the protocol and data management web services. Zenodo.

Nina Jeliazkova, Nikolay Kochev, Vedrin Jeliazkov, Micha Rautenberg, Egon Willighagen, Friederike Ehrhart, Penny Nymark, Barry Hardy. (2016). Deliverable Report D3.2 Data Management System with extended search capabilities. Zenodo.

Nina Jeliazkova, Nikolay Kochev, Vedrin Jeliazkov, Egon Willighagen, Friederike Ehrhart, Barry Hardy. (2016). Deliverable Report D5.5 User application for searching and downloading eNanoMapper data. Zenodo.

Publications

• N. Jeliazkova et al., The eNanoMapper database for nanomaterial safety information, Beilstein J. Nanotechnol., vol. 6, pp. 1609–1634, Jul. 2015. 10.3762/bjnano.6.165

• Hastings, J.; Jeliazkova, N.; Owen, G.; Tsiliki, G.; Munteanu, C. R.; Steinbeck, C.; Willighagen, E. eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment. J. Biomed. Semantics 2015, 6, 10 DOI: 10.1186/s13326-015-0005-5.

• N. Jeliazkova et al., The first eNanoMapper prototype: A substance database to support safe-by-design, in 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2014, pp. 1–9. doi:10.1109/BIBM.2014.6999367

• N. Kochev, R. Grafstrom, N. Jeliazkova How to store nanomaterial safety data: meet eNanoMapper database, poster at SENN 2015